Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
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![Maximum-likelihood phylogenetic tree based on genomic sequencing reads. The maximum likelihood tree was generated using RealPhy (Bertels et al. 2014) and RaxML (Stamatakis et al. 2005). Bootstrap values are expressed as percentages of 500 trials. Type and pathotype strains are indicated by T and PT, respectively. Whole-genome shotgun sequence reads were obtained from the Sequence Read Archive (Leinonen et al. 2011) via BioProjects PRJNA73853, PRJNA163305, PRJNA163307, PRJNA31213, PRJNA374510, PRJNA374557, PRJNA439013, PRJNA439327, PRJNA439328, PRJNA439329, and PRJNA449864 (Lang et al. 2017; Sanko et al. 2018; Wasukira et al. 2014, 2012). The cartoon images denote typical host plants from which each clade of bacteria have been typically isolated. Xanthomonas vasicola pv. holcicola strain NCPPB 989 was isolated from velvet grass (Holcus sp.), while strains NCPPB 1060, NCPPB 1241, and NCPPB 2417 were isolated from sorghum (Sorghum vulgare). Strains of X. campestris pv. musacearum were isolated from banana (Musa spp.) except for NCPPB 2005, which was isolated from enset (Ensete ventricosum). Strains of X. campestris pv. zeae were isolated from maize (Zea mays), as was X. campestris pv. vasculorum NCPPB 206. The remaining X. campestris pv. vasculorum strains were isolated from sugarcane (Saccharum spp.). The pathotype strain of X. campestris pv. arecae, namely NCPPB 2649, was isolated from betel palm (Areca catechu). © The Author(s). [Image: 3VLJ]](https://data.landcareresearch.co.nz/Image/3VLJ/SysPortalThumb)
![© All rights reserved. [Image: 4F7C]](https://data.landcareresearch.co.nz/Image/4F7C/SysPortalPreview)
![Maximum-likelihood phylogenetic tree based on genomic sequencing reads. The maximum likelihood tree was generated using RealPhy (Bertels et al. 2014) and RaxML (Stamatakis et al. 2005). Bootstrap values are expressed as percentages of 500 trials. Type and pathotype strains are indicated by T and PT, respectively. Whole-genome shotgun sequence reads were obtained from the Sequence Read Archive (Leinonen et al. 2011) via BioProjects PRJNA73853, PRJNA163305, PRJNA163307, PRJNA31213, PRJNA374510, PRJNA374557, PRJNA439013, PRJNA439327, PRJNA439328, PRJNA439329, and PRJNA449864 (Lang et al. 2017; Sanko et al. 2018; Wasukira et al. 2014, 2012). The cartoon images denote typical host plants from which each clade of bacteria have been typically isolated. Xanthomonas vasicola pv. holcicola strain NCPPB 989 was isolated from velvet grass (Holcus sp.), while strains NCPPB 1060, NCPPB 1241, and NCPPB 2417 were isolated from sorghum (Sorghum vulgare). Strains of X. campestris pv. musacearum were isolated from banana (Musa spp.) except for NCPPB 2005, which was isolated from enset (Ensete ventricosum). Strains of X. campestris pv. zeae were isolated from maize (Zea mays), as was X. campestris pv. vasculorum NCPPB 206. The remaining X. campestris pv. vasculorum strains were isolated from sugarcane (Saccharum spp.). The pathotype strain of X. campestris pv. arecae, namely NCPPB 2649, was isolated from betel palm (Areca catechu). © The Author(s). [Image: 3VLJ]](https://data.landcareresearch.co.nz/Image/3VLJ/SysPortalPreview)
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Xanthomonas vasicola pv. vasculorum Studholme et al., Phytopath. (2020)
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Nomenclature
Studholme et al.
Studholme et al.
2020
ICNP
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
pv.
Xanthomonas vasicola pv. vasculorum
Classification
Synonyms
Associations
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Descriptions
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Description as for the species and this pathovar is distinguished on the basis of phytopathogenic specialization and includes the strains of the former taxon X. campestris pv. vasculorum type B and pathogens from corn. The pathovar is identified to species and distinguished from other pathovars by its gyrB gene sequence (Parkinson et al. 2009) and genome-wide sequence analysis. It is not known whether the strains being transferred to this taxon conform to the species description for metabolic activity. According to previously published work (Aritua et al. 2007; Coutinho et al. 2015; Hayward 1962; Karamura et al. 2015), the natural host range includes Saccharum spp., Zea mays, and Eucalyptus grandis and does not cause symptoms on banana.
Pathotype strain: NCPPB 4614 (= CFBP 8549 = SAM119).
Taxonomic concepts
Xanthomonas campestris pv. zeae
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Xanthomonas vasicola pv. vasculorum Studholme et al.
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Xanthomonas vasicola pv. vasculorum Vauteriun et al.
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Xanthomonas vasicola pv. vasculorum (Cobb 1894) Lang et al.
Xanthomonas vasicola pv. vasculorum Studholme et al. 2020
Xanthomonas vasicola pv. vasculorum Vauteriun et al.
Collections
Notes
typification
Pathotype strain: NCPPB 4614 (= CFBP 8549 = SAM119)
Metadata
e897349e-07a6-47f2-bccd-b2d0f2090e3e
scientific name
Names_Fungi
26 September 2021
26 September 2021
