Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al. 1995
![Leaf stripe of sorghum hybrid Trudan grass. © Landcare Research. [Image: 2R4N]](https://data.landcareresearch.co.nz/Image/2R4N/SysPortalThumb)
![Leaf stripe of sorghum hybrid Trudan grass. © Landcare Research. [Image: 2R4P]](https://data.landcareresearch.co.nz/Image/2R4P/SysPortalThumb)
![ICMP 588 on YNA. Creator: Diana Lee. © Landcare Research. [Image: 3NRU]](https://data.landcareresearch.co.nz/Image/3NRU/SysPortalThumb)
![ICMP 9969 on YNA. © Landcare Research. [Image: 47LK]](https://data.landcareresearch.co.nz/Image/47LK/SysPortalThumb)
![ICMP 9970 on YNA. © Landcare Research. [Image: 47ND]](https://data.landcareresearch.co.nz/Image/47ND/SysPortalThumb)
![ICMP 575 on YNA. © Landcare Research. [Image: 5A1G]](https://data.landcareresearch.co.nz/Image/5A1G/SysPortalThumb)
![Maximum-likelihood phylogenetic tree based on genomic sequencing reads. The maximum likelihood tree was generated using RealPhy (Bertels et al. 2014) and RaxML (Stamatakis et al. 2005). Bootstrap values are expressed as percentages of 500 trials. Type and pathotype strains are indicated by T and PT, respectively. Whole-genome shotgun sequence reads were obtained from the Sequence Read Archive (Leinonen et al. 2011) via BioProjects PRJNA73853, PRJNA163305, PRJNA163307, PRJNA31213, PRJNA374510, PRJNA374557, PRJNA439013, PRJNA439327, PRJNA439328, PRJNA439329, and PRJNA449864 (Lang et al. 2017; Sanko et al. 2018; Wasukira et al. 2014, 2012). The cartoon images denote typical host plants from which each clade of bacteria have been typically isolated. Xanthomonas vasicola pv. holcicola strain NCPPB 989 was isolated from velvet grass (Holcus sp.), while strains NCPPB 1060, NCPPB 1241, and NCPPB 2417 were isolated from sorghum (Sorghum vulgare). Strains of X. campestris pv. musacearum were isolated from banana (Musa spp.) except for NCPPB 2005, which was isolated from enset (Ensete ventricosum). Strains of X. campestris pv. zeae were isolated from maize (Zea mays), as was X. campestris pv. vasculorum NCPPB 206. The remaining X. campestris pv. vasculorum strains were isolated from sugarcane (Saccharum spp.). The pathotype strain of X. campestris pv. arecae, namely NCPPB 2649, was isolated from betel palm (Areca catechu). © The Author(s). [Image: 3VLJ]](https://data.landcareresearch.co.nz/Image/3VLJ/SysPortalThumb)
![Leaf stripe of sorghum hybrid Trudan grass. © Landcare Research. [Image: 2R4N]](https://data.landcareresearch.co.nz/Image/2R4N/SysPortalPreview)
![Leaf stripe of sorghum hybrid Trudan grass. © Landcare Research. [Image: 2R4P]](https://data.landcareresearch.co.nz/Image/2R4P/SysPortalPreview)
![ICMP 588 on YNA. Creator: Diana Lee. © Landcare Research. [Image: 3NRU]](https://data.landcareresearch.co.nz/Image/3NRU/SysPortalPreview)
![ICMP 9969 on YNA. © Landcare Research. [Image: 47LK]](https://data.landcareresearch.co.nz/Image/47LK/SysPortalPreview)
![ICMP 9970 on YNA. © Landcare Research. [Image: 47ND]](https://data.landcareresearch.co.nz/Image/47ND/SysPortalPreview)
![ICMP 575 on YNA. © Landcare Research. [Image: 5A1G]](https://data.landcareresearch.co.nz/Image/5A1G/SysPortalPreview)
![Maximum-likelihood phylogenetic tree based on genomic sequencing reads. The maximum likelihood tree was generated using RealPhy (Bertels et al. 2014) and RaxML (Stamatakis et al. 2005). Bootstrap values are expressed as percentages of 500 trials. Type and pathotype strains are indicated by T and PT, respectively. Whole-genome shotgun sequence reads were obtained from the Sequence Read Archive (Leinonen et al. 2011) via BioProjects PRJNA73853, PRJNA163305, PRJNA163307, PRJNA31213, PRJNA374510, PRJNA374557, PRJNA439013, PRJNA439327, PRJNA439328, PRJNA439329, and PRJNA449864 (Lang et al. 2017; Sanko et al. 2018; Wasukira et al. 2014, 2012). The cartoon images denote typical host plants from which each clade of bacteria have been typically isolated. Xanthomonas vasicola pv. holcicola strain NCPPB 989 was isolated from velvet grass (Holcus sp.), while strains NCPPB 1060, NCPPB 1241, and NCPPB 2417 were isolated from sorghum (Sorghum vulgare). Strains of X. campestris pv. musacearum were isolated from banana (Musa spp.) except for NCPPB 2005, which was isolated from enset (Ensete ventricosum). Strains of X. campestris pv. zeae were isolated from maize (Zea mays), as was X. campestris pv. vasculorum NCPPB 206. The remaining X. campestris pv. vasculorum strains were isolated from sugarcane (Saccharum spp.). The pathotype strain of X. campestris pv. arecae, namely NCPPB 2649, was isolated from betel palm (Areca catechu). © The Author(s). [Image: 3VLJ]](https://data.landcareresearch.co.nz/Image/3VLJ/SysPortalPreview)
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Details
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al., Int. J. Sys. Bact. 45 (1995)
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al. 1995
Biostatus
Nomenclature
Vauterin et al.
Elliott
(Elliott) Vauterin et al.
1995
ICNP
pv.
Xanthomonas vasicola pv. holcicola
Classification
Associations
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Descriptions
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al. 1995
Description is as presented by Vauterin et al. (1995). The pathovar is distinguished on the basis of phytopathogenic specialization. As shown here and elsewhere (Lang et al. 2017), the pathovar is distinct from other pathovars by MLSA and genome-wide sequence analysis. According to Bradbury (1986), gelatin and starch are hydrolyzed by most isolates examined. The natural host range includes: Panicum miliaceum, Sorghum spp., S. almum, S. bicolor (S. vulgare), S. caffrorum, S. durra, S. halepense, S. sudanense, S. technicum (S. bicolor var. technicus), and Zea mays. The artificial host range (by inoculation) includes Echinochloa frumentacea, Pennisetum typhoides, and Setaria italica.
Pathotype strain: CFBP 2543 (= ICMP 3103 = LMG 736 = NCPPB 2417 = PDDCC 3103).
Taxonomic concepts
Xanthomonas campestris pv. holcicola (Elliott 1930) Dye
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al. 1995
Xanthomonas campestris pv. holcicola (Elliott 1930) Dye 1978 (1978)
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al. 1995
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al.
Xanthomonas vasicola pv. holcicola (Elliott 1930) Vauterin et al. 1995
Collections
Notes
taxonomic status
The pathotype (ICMP 3103) of the pathovar (pv. holcicola) is the same as the type strain (ICMP 3103) of the species (X. vasicola).
Metadata
a013c968-5a99-4e5a-8912-40da4ad8dbc8
scientific name
Names_Fungi
7 July 2008
17 January 2022
